Detailed information of SNP:
|
SNP ID:
sf0614454472(Gbrowse)
Chromosome: chr06 Position: 14454472 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1384 | 96.17% | 3.83% |
| All Indica | 767 | 93.61% | 6.39% |
| All Japonica | 495 | 100.00% | 0.00% |
| Aus | 67 | 95.52% | 4.48% |
| Indica I | 365 | 93.97% | 6.03% |
| Indica II | 207 | 93.24% | 6.76% |
| Indica Intermediate | 195 | 93.33% | 6.67% |
| Temperate Japonica | 334 | 100.00% | 0.00% |
| Tropical Japonica | 93 | 100.00% | 0.00% |
| Japonica Intermediate | 68 | 100.00% | 0.00% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 41 | 97.56% | 2.44% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0614454472 | G->A | INTERGENIC | None |