Detailed information of SNP:
|
SNP ID:
sf0614455601(Gbrowse)
Chromosome: chr06 Position: 14455601 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1371 | 95.04% | 4.96% |
| All Indica | 758 | 92.61% | 7.39% |
| All Japonica | 495 | 98.99% | 1.01% |
| Aus | 64 | 93.75% | 6.25% |
| Indica I | 359 | 94.99% | 5.01% |
| Indica II | 197 | 90.86% | 9.14% |
| Indica Intermediate | 202 | 90.10% | 9.90% |
| Temperate Japonica | 334 | 99.10% | 0.90% |
| Tropical Japonica | 93 | 98.92% | 1.08% |
| Japonica Intermediate | 68 | 98.53% | 1.47% |
| Group VI/Aromatic | 14 | 92.86% | 7.14% |
| Intermediate | 40 | 95.00% | 5.00% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0614455601 | G->A | INTERGENIC | None |