Detailed information of SNP:
|
SNP ID:
sf0614470822(Gbrowse)
Chromosome: chr06 Position: 14470822 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1397 | 56.26% | 43.74% |
| All Indica | 780 | 25.13% | 74.87% |
| All Japonica | 496 | 99.19% | 0.81% |
| Aus | 65 | 92.31% | 7.69% |
| Indica I | 368 | 17.93% | 82.07% |
| Indica II | 207 | 28.99% | 71.01% |
| Indica Intermediate | 205 | 34.15% | 65.85% |
| Temperate Japonica | 335 | 99.70% | 0.30% |
| Tropical Japonica | 93 | 97.85% | 2.15% |
| Japonica Intermediate | 68 | 98.53% | 1.47% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 42 | 57.14% | 42.86% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0614470822 | G->A | INTERGENIC | None |