Detailed information of SNP:
|
SNP ID:
sf0614542894(Gbrowse)
Chromosome: chr06 Position: 14542894 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1364 | 93.11% | 6.89% |
| All Indica | 749 | 88.12% | 11.88% |
| All Japonica | 496 | 100.00% | 0.00% |
| Aus | 65 | 96.92% | 3.08% |
| Indica I | 356 | 90.73% | 9.27% |
| Indica II | 199 | 88.44% | 11.56% |
| Indica Intermediate | 194 | 82.99% | 17.01% |
| Temperate Japonica | 334 | 100.00% | 0.00% |
| Tropical Japonica | 94 | 100.00% | 0.00% |
| Japonica Intermediate | 68 | 100.00% | 0.00% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 40 | 92.50% | 7.50% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0614542894 | G->A | INTERGENIC | None |