Detailed information of SNP:
|
SNP ID:
sf0614718644(Gbrowse)
Chromosome: chr06 Position: 14718644 |
Major allele:
A
Minor allele: G Reference allele: A |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of A(major allele) | Frequency of G(minor allele) |
|---|---|---|---|
| All | 1373 | 68.97% | 31.03% |
| All Indica | 757 | 58.78% | 41.22% |
| All Japonica | 496 | 94.56% | 5.44% |
| Aus | 67 | 13.43% | 86.57% |
| Indica I | 356 | 71.35% | 28.65% |
| Indica II | 201 | 48.76% | 51.24% |
| Indica Intermediate | 200 | 46.50% | 53.50% |
| Temperate Japonica | 335 | 98.51% | 1.49% |
| Tropical Japonica | 94 | 81.91% | 18.09% |
| Japonica Intermediate | 67 | 92.54% | 7.46% |
| Group VI/Aromatic | 14 | 0.00% | 100.00% |
| Intermediate | 39 | 61.54% | 38.46% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0614718644 | A->G | INTERGENIC | None |