Detailed information of SNP:
SNP ID:
sf0614784444(Gbrowse)
Chromosome: chr06 Position: 14784444 |
Major allele:
C
Minor allele: T Reference allele: C |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
Populations | Population Size | Frequency of C(major allele) | Frequency of T(minor allele) |
---|---|---|---|
All | 1419 | 89.85% | 10.15% |
All Indica | 799 | 83.10% | 16.90% |
All Japonica | 497 | 99.80% | 0.20% |
Aus | 67 | 94.03% | 5.97% |
Indica I | 375 | 82.40% | 17.60% |
Indica II | 213 | 85.92% | 14.08% |
Indica Intermediate | 211 | 81.52% | 18.48% |
Temperate Japonica | 335 | 99.70% | 0.30% |
Tropical Japonica | 94 | 100.00% | 0.00% |
Japonica Intermediate | 68 | 100.00% | 0.00% |
Group VI/Aromatic | 14 | 100.00% | 0.00% |
Intermediate | 42 | 90.48% | 9.52% |
Allele Var Effect:
SNP ID | Var | Gene | Effect/Location |
---|---|---|---|
sf0614784444 | C->T | INTERGENIC | None |