Detailed information of SNP:
|
SNP ID:
sf0614787219(Gbrowse)
Chromosome: chr06 Position: 14787219 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1413 | 54.64% | 45.36% |
| All Indica | 798 | 23.43% | 76.57% |
| All Japonica | 492 | 98.58% | 1.42% |
| Aus | 67 | 89.55% | 10.45% |
| Indica I | 374 | 16.31% | 83.69% |
| Indica II | 213 | 27.70% | 72.30% |
| Indica Intermediate | 211 | 31.75% | 68.25% |
| Temperate Japonica | 335 | 99.10% | 0.90% |
| Tropical Japonica | 90 | 97.78% | 2.22% |
| Japonica Intermediate | 67 | 97.01% | 2.99% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 42 | 61.90% | 38.10% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0614787219 | G->A | INTERGENIC | None |