Detailed information of SNP:
|
SNP ID:
sf0614820166(Gbrowse)
Chromosome: chr06 Position: 14820166 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1397 | 61.99% | 38.01% |
| All Indica | 779 | 34.27% | 65.73% |
| All Japonica | 497 | 99.60% | 0.40% |
| Aus | 66 | 90.91% | 9.09% |
| Indica I | 361 | 27.42% | 72.58% |
| Indica II | 209 | 39.71% | 60.29% |
| Indica Intermediate | 209 | 40.67% | 59.33% |
| Temperate Japonica | 335 | 99.70% | 0.30% |
| Tropical Japonica | 94 | 100.00% | 0.00% |
| Japonica Intermediate | 68 | 98.53% | 1.47% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 41 | 73.17% | 26.83% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0614820166 | G->A | INTERGENIC | None |