Detailed information of SNP:
|
SNP ID:
sf0614870127(Gbrowse)
Chromosome: chr06 Position: 14870127 |
Major allele:
C
Minor allele: T Reference allele: C |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of C(major allele) | Frequency of T(minor allele) |
|---|---|---|---|
| All | 1381 | 96.96% | 3.04% |
| All Indica | 762 | 95.28% | 4.72% |
| All Japonica | 496 | 99.60% | 0.40% |
| Aus | 67 | 97.01% | 2.99% |
| Indica I | 364 | 98.08% | 1.92% |
| Indica II | 198 | 93.94% | 6.06% |
| Indica Intermediate | 200 | 91.50% | 8.50% |
| Temperate Japonica | 334 | 99.40% | 0.60% |
| Tropical Japonica | 94 | 100.00% | 0.00% |
| Japonica Intermediate | 68 | 100.00% | 0.00% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 42 | 95.24% | 4.76% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0614870127 | C->T | INTERGENIC | None |