Detailed information of SNP:
|
SNP ID:
sf0614944452(Gbrowse)
Chromosome: chr06 Position: 14944452 |
Major allele:
G
Minor allele: A Reference allele: A |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1412 | 53.19% | 46.81% |
| All Indica | 792 | 87.50% | 12.50% |
| All Japonica | 497 | 5.23% | 94.77% |
| Aus | 67 | 17.91% | 82.09% |
| Indica I | 371 | 86.52% | 13.48% |
| Indica II | 212 | 91.04% | 8.96% |
| Indica Intermediate | 209 | 85.65% | 14.35% |
| Temperate Japonica | 335 | 1.49% | 98.51% |
| Tropical Japonica | 94 | 15.96% | 84.04% |
| Japonica Intermediate | 68 | 8.82% | 91.18% |
| Group VI/Aromatic | 14 | 0.00% | 100.00% |
| Intermediate | 42 | 47.62% | 52.38% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0614944452 | A->G | INTERGENIC | None |