Detailed information of SNP:
|
SNP ID:
sf0614983301(Gbrowse)
Chromosome: chr06 Position: 14983301 |
Major allele:
A
Minor allele: G Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of A(major allele) | Frequency of G(minor allele) |
|---|---|---|---|
| All | 1416 | 57.77% | 42.23% |
| All Indica | 796 | 95.73% | 4.27% |
| All Japonica | 497 | 2.41% | 97.59% |
| Aus | 67 | 19.40% | 80.60% |
| Indica I | 374 | 97.06% | 2.94% |
| Indica II | 213 | 95.31% | 4.69% |
| Indica Intermediate | 209 | 93.78% | 6.22% |
| Temperate Japonica | 335 | 1.19% | 98.81% |
| Tropical Japonica | 94 | 6.38% | 93.62% |
| Japonica Intermediate | 68 | 2.94% | 97.06% |
| Group VI/Aromatic | 14 | 92.86% | 7.14% |
| Intermediate | 42 | 42.86% | 57.14% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0614983301 | G->A | INTERGENIC | None |