Detailed information of SNP:
|
SNP ID:
sf0615168966(Gbrowse)
Chromosome: chr06 Position: 15168966 |
Major allele:
G
Minor allele: A Reference allele: A |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1411 | 57.19% | 42.81% |
| All Indica | 794 | 86.02% | 13.98% |
| All Japonica | 496 | 4.84% | 95.16% |
| Aus | 67 | 95.52% | 4.48% |
| Indica I | 372 | 83.60% | 16.40% |
| Indica II | 212 | 89.15% | 10.85% |
| Indica Intermediate | 210 | 87.14% | 12.86% |
| Temperate Japonica | 335 | 1.19% | 98.81% |
| Tropical Japonica | 94 | 14.89% | 85.11% |
| Japonica Intermediate | 67 | 8.96% | 91.04% |
| Group VI/Aromatic | 13 | 92.31% | 7.69% |
| Intermediate | 41 | 58.54% | 41.46% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0615168966 | A->G | INTERGENIC | None |