Detailed information of SNP:



SNP ID: sf0616469950(Gbrowse)

Chromosome: chr06

Position: 16469950
Major allele: G

Minor allele: A

Reference allele: G

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of G(major allele)Frequency of A(minor allele)
All1284 96.88% 3.12%
All Indica666 93.99% 6.01%
All Japonica496 100.00% 0.00%
Aus67 100.00% 0.00%
Indica I293 90.10% 9.90%
Indica II181 98.34% 1.66%
Indica Intermediate192 95.83% 4.17%
Temperate Japonica335 100.00% 0.00%
Tropical Japonica94 100.00% 0.00%
Japonica Intermediate67 100.00% 0.00%
Group VI/Aromatic14 100.00% 0.00%
Intermediate41 100.00% 0.00%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf0616469950 G->A INTERGENIC None