Detailed information of SNP:
|
SNP ID:
sf0617148055(Gbrowse)
Chromosome: chr06 Position: 17148055 |
Major allele:
G
Minor allele: A Reference allele: A |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1369 | 76.19% | 23.81% |
| All Indica | 798 | 99.25% | 0.75% |
| All Japonica | 451 | 30.38% | 69.62% |
| Aus | 67 | 95.52% | 4.48% |
| Indica I | 374 | 98.40% | 1.60% |
| Indica II | 213 | 100.00% | 0.00% |
| Indica Intermediate | 211 | 100.00% | 0.00% |
| Temperate Japonica | 309 | 10.36% | 89.64% |
| Tropical Japonica | 84 | 85.71% | 14.29% |
| Japonica Intermediate | 58 | 56.90% | 43.10% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 39 | 92.31% | 7.69% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0617148055 | A->G | INTERGENIC | None |