Detailed information of SNP:
|
SNP ID:
sf0617483077(Gbrowse)
Chromosome: chr06 Position: 17483077 |
Major allele:
G
Minor allele: A Reference allele: A |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1416 | 63.84% | 36.16% |
| All Indica | 796 | 95.35% | 4.65% |
| All Japonica | 497 | 10.06% | 89.94% |
| Aus | 67 | 86.57% | 13.43% |
| Indica I | 375 | 94.67% | 5.33% |
| Indica II | 212 | 96.23% | 3.77% |
| Indica Intermediate | 209 | 95.69% | 4.31% |
| Temperate Japonica | 335 | 7.76% | 92.24% |
| Tropical Japonica | 94 | 15.96% | 84.04% |
| Japonica Intermediate | 68 | 13.24% | 86.76% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 42 | 54.76% | 45.24% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0617483077 | A->G | INTERGENIC | None |