Detailed information of SNP:
|
SNP ID:
sf0617613537(Gbrowse)
Chromosome: chr06 Position: 17613537 |
Major allele:
G
Minor allele: A Reference allele: A |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1410 | 55.74% | 44.26% |
| All Indica | 792 | 91.29% | 8.71% |
| All Japonica | 497 | 1.21% | 98.79% |
| Aus | 67 | 41.79% | 58.21% |
| Indica I | 369 | 91.33% | 8.67% |
| Indica II | 213 | 95.31% | 4.69% |
| Indica Intermediate | 210 | 87.14% | 12.86% |
| Temperate Japonica | 335 | 1.19% | 98.81% |
| Tropical Japonica | 94 | 0.00% | 100.00% |
| Japonica Intermediate | 68 | 2.94% | 97.06% |
| Group VI/Aromatic | 14 | 42.86% | 57.14% |
| Intermediate | 40 | 57.50% | 42.50% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0617613537 | A->G | INTERGENIC | None |