Detailed information of SNP:
|
SNP ID:
sf0617625075(Gbrowse)
Chromosome: chr06 Position: 17625075 |
Major allele:
A
Minor allele: G Reference allele: A |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of A(major allele) | Frequency of G(minor allele) |
|---|---|---|---|
| All | 1369 | 95.33% | 4.67% |
| All Indica | 767 | 95.57% | 4.43% |
| All Japonica | 483 | 95.03% | 4.97% |
| Aus | 65 | 95.38% | 4.62% |
| Indica I | 359 | 97.21% | 2.79% |
| Indica II | 211 | 94.31% | 5.69% |
| Indica Intermediate | 197 | 93.91% | 6.09% |
| Temperate Japonica | 335 | 93.73% | 6.27% |
| Tropical Japonica | 83 | 100.00% | 0.00% |
| Japonica Intermediate | 65 | 95.38% | 4.62% |
| Group VI/Aromatic | 12 | 83.33% | 16.67% |
| Intermediate | 42 | 97.62% | 2.38% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0617625075 | A->G | INTERGENIC | None |