Detailed information of SNP:
|
SNP ID:
sf0617634658(Gbrowse)
Chromosome: chr06 Position: 17634658 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1413 | 95.12% | 4.88% |
| All Indica | 794 | 94.33% | 5.67% |
| All Japonica | 497 | 95.77% | 4.23% |
| Aus | 67 | 97.01% | 2.99% |
| Indica I | 372 | 95.16% | 4.84% |
| Indica II | 211 | 98.10% | 1.90% |
| Indica Intermediate | 211 | 89.10% | 10.90% |
| Temperate Japonica | 335 | 99.70% | 0.30% |
| Tropical Japonica | 94 | 85.11% | 14.89% |
| Japonica Intermediate | 68 | 91.18% | 8.82% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 41 | 97.56% | 2.44% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0617634658 | G->A | INTERGENIC | None |