Detailed information of SNP:
|
SNP ID:
sf0617635453(Gbrowse)
Chromosome: chr06 Position: 17635453 |
Major allele:
A
Minor allele: G Reference allele: A |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of A(major allele) | Frequency of G(minor allele) |
|---|---|---|---|
| All | 1415 | 93.29% | 6.71% |
| All Indica | 796 | 92.09% | 7.91% |
| All Japonica | 497 | 95.77% | 4.23% |
| Aus | 66 | 98.48% | 1.52% |
| Indica I | 374 | 92.51% | 7.49% |
| Indica II | 212 | 97.64% | 2.36% |
| Indica Intermediate | 210 | 85.71% | 14.29% |
| Temperate Japonica | 335 | 99.70% | 0.30% |
| Tropical Japonica | 94 | 85.11% | 14.89% |
| Japonica Intermediate | 68 | 91.18% | 8.82% |
| Group VI/Aromatic | 14 | 50.00% | 50.00% |
| Intermediate | 42 | 92.86% | 7.14% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0617635453 | A->G | INTERGENIC | None |