Detailed information of SNP:



SNP ID: sf0617925435(Gbrowse)

Chromosome: chr06

Position: 17925435
Major allele: A

Minor allele: T

Reference allele: A

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of A(major allele)Frequency of T(minor allele)
All1419 98.17% 1.83%
All Indica799 96.87% 3.13%
All Japonica497 99.80% 0.20%
Aus67 100.00% 0.00%
Indica I375 100.00% 0.00%
Indica II213 88.73% 11.27%
Indica Intermediate211 99.53% 0.47%
Temperate Japonica335 99.70% 0.30%
Tropical Japonica94 100.00% 0.00%
Japonica Intermediate68 100.00% 0.00%
Group VI/Aromatic14 100.00% 0.00%
Intermediate42 100.00% 0.00%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf0617925435 A->T INTERGENIC None