Detailed information of SNP:



SNP ID: sf0617982873(Gbrowse)

Chromosome: chr06

Position: 17982873
Major allele: G

Minor allele: C

Reference allele: C

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of G(major allele)Frequency of C(minor allele)
All1359 77.63% 22.37%
All Indica796 98.87% 1.13%
All Japonica441 34.01% 65.99%
Aus67 100.00% 0.00%
Indica I372 99.73% 0.27%
Indica II213 98.12% 1.88%
Indica Intermediate211 98.10% 1.90%
Temperate Japonica285 18.95% 81.05%
Tropical Japonica91 73.63% 26.37%
Japonica Intermediate65 44.62% 55.38%
Group VI/Aromatic14 100.00% 0.00%
Intermediate41 90.24% 9.76%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf0617982873 C->G INTERGENIC None