Detailed information of SNP:
|
SNP ID:
sf0618042066(Gbrowse)
Chromosome: chr06 Position: 18042066 |
Major allele:
T
Minor allele: G Reference allele: T |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of T(major allele) | Frequency of G(minor allele) |
|---|---|---|---|
| All | 1263 | 95.65% | 4.35% |
| All Indica | 679 | 93.08% | 6.92% |
| All Japonica | 494 | 99.19% | 0.81% |
| Aus | 37 | 91.89% | 8.11% |
| Indica I | 304 | 92.11% | 7.89% |
| Indica II | 190 | 94.74% | 5.26% |
| Indica Intermediate | 185 | 92.97% | 7.03% |
| Temperate Japonica | 333 | 99.10% | 0.90% |
| Tropical Japonica | 93 | 100.00% | 0.00% |
| Japonica Intermediate | 68 | 98.53% | 1.47% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 39 | 97.44% | 2.56% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0618042066 | T->G | INTERGENIC | None |