Detailed information of SNP:
|
SNP ID:
sf0618124726(Gbrowse)
Chromosome: chr06 Position: 18124726 |
Major allele:
A
Minor allele: G Reference allele: A |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of A(major allele) | Frequency of G(minor allele) |
|---|---|---|---|
| All | 1362 | 96.18% | 3.82% |
| All Indica | 746 | 93.57% | 6.43% |
| All Japonica | 497 | 100.00% | 0.00% |
| Aus | 64 | 96.88% | 3.12% |
| Indica I | 346 | 93.06% | 6.94% |
| Indica II | 204 | 94.61% | 5.39% |
| Indica Intermediate | 196 | 93.37% | 6.63% |
| Temperate Japonica | 335 | 100.00% | 0.00% |
| Tropical Japonica | 94 | 100.00% | 0.00% |
| Japonica Intermediate | 68 | 100.00% | 0.00% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 41 | 95.12% | 4.88% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0618124726 | A->G | INTERGENIC | None |