Detailed information of SNP:
|
SNP ID:
sf0618508094(Gbrowse)
Chromosome: chr06 Position: 18508094 |
Major allele:
A
Minor allele: G Reference allele: A |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of A(major allele) | Frequency of G(minor allele) |
|---|---|---|---|
| All | 1347 | 51.45% | 48.55% |
| All Indica | 737 | 20.35% | 79.65% |
| All Japonica | 494 | 97.98% | 2.02% |
| Aus | 61 | 40.98% | 59.02% |
| Indica I | 331 | 22.96% | 77.04% |
| Indica II | 206 | 14.56% | 85.44% |
| Indica Intermediate | 200 | 22.00% | 78.00% |
| Temperate Japonica | 333 | 98.50% | 1.50% |
| Tropical Japonica | 93 | 94.62% | 5.38% |
| Japonica Intermediate | 68 | 100.00% | 0.00% |
| Group VI/Aromatic | 14 | 92.86% | 7.14% |
| Intermediate | 41 | 51.22% | 48.78% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0618508094 | A->G | INTERGENIC | None |