Detailed information of SNP:
SNP ID:
sf0618968988(Gbrowse)
Chromosome: chr06 Position: 18968988 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
---|---|---|---|
All | 1413 | 50.18% | 49.82% |
All Indica | 798 | 79.95% | 20.05% |
All Japonica | 493 | 2.23% | 97.77% |
Aus | 67 | 38.81% | 61.19% |
Indica I | 374 | 76.47% | 23.53% |
Indica II | 213 | 92.96% | 7.04% |
Indica Intermediate | 211 | 72.99% | 27.01% |
Temperate Japonica | 331 | 3.02% | 96.98% |
Tropical Japonica | 94 | 0.00% | 100.00% |
Japonica Intermediate | 68 | 1.47% | 98.53% |
Group VI/Aromatic | 13 | 76.92% | 23.08% |
Intermediate | 42 | 57.14% | 42.86% |
Allele Var Effect:
SNP ID | Var | Gene | Effect/Location |
---|---|---|---|
sf0618968988 | G->A | INTERGENIC | None |