Detailed information of SNP:
SNP ID:
sf0618986745(Gbrowse)
Chromosome: chr06 Position: 18986745 |
Major allele:
A
Minor allele: T Reference allele: A |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
Populations | Population Size | Frequency of A(major allele) | Frequency of T(minor allele) |
---|---|---|---|
All | 1419 | 95.28% | 4.72% |
All Indica | 799 | 98.00% | 2.00% |
All Japonica | 497 | 97.99% | 2.01% |
Aus | 67 | 41.79% | 58.21% |
Indica I | 375 | 100.00% | 0.00% |
Indica II | 213 | 100.00% | 0.00% |
Indica Intermediate | 211 | 92.42% | 7.58% |
Temperate Japonica | 335 | 99.70% | 0.30% |
Tropical Japonica | 94 | 90.43% | 9.57% |
Japonica Intermediate | 68 | 100.00% | 0.00% |
Group VI/Aromatic | 14 | 92.86% | 7.14% |
Intermediate | 42 | 97.62% | 2.38% |
Allele Var Effect:
SNP ID | Var | Gene | Effect/Location |
---|---|---|---|
sf0618986745 | A->T | INTERGENIC | None |