Detailed information of SNP:



SNP ID: sf0618987044(Gbrowse)

Chromosome: chr06

Position: 18987044
Major allele: C

Minor allele: T

Reference allele: C

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of C(major allele)Frequency of T(minor allele)
All1418 97.32% 2.68%
All Indica798 95.61% 4.39%
All Japonica497 99.80% 0.20%
Aus67 100.00% 0.00%
Indica I374 97.06% 2.94%
Indica II213 95.31% 4.69%
Indica Intermediate211 93.36% 6.64%
Temperate Japonica335 99.70% 0.30%
Tropical Japonica94 100.00% 0.00%
Japonica Intermediate68 100.00% 0.00%
Group VI/Aromatic14 100.00% 0.00%
Intermediate42 95.24% 4.76%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf0618987044 C->T INTERGENIC None