Detailed information of SNP:



SNP ID: sf0620178420(Gbrowse)

Chromosome: chr06

Position: 20178420
Major allele: A

Minor allele: G

Reference allele: A

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of A(major allele)Frequency of G(minor allele)
All1417 76.43% 23.57%
All Indica797 86.83% 13.17%
All Japonica497 72.84% 27.16%
Aus67 0.00% 100.00%
Indica I375 82.93% 17.07%
Indica II213 82.16% 17.84%
Indica Intermediate209 98.56% 1.44%
Temperate Japonica335 81.19% 18.81%
Tropical Japonica94 67.02% 32.98%
Japonica Intermediate68 39.71% 60.29%
Group VI/Aromatic14 0.00% 100.00%
Intermediate42 69.05% 30.95%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf0620178420 A->G INTERGENIC None