Detailed information of SNP:



SNP ID: sf0620192670(Gbrowse)

Chromosome: chr06

Position: 20192670
Major allele: C

Minor allele: A

Reference allele: C

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of C(major allele)Frequency of A(minor allele)
All1419 92.60% 7.40%
All Indica799 99.25% 0.75%
All Japonica497 96.58% 3.42%
Aus67 0.00% 100.00%
Indica I375 100.00% 0.00%
Indica II213 98.12% 1.88%
Indica Intermediate211 99.05% 0.95%
Temperate Japonica335 97.91% 2.09%
Tropical Japonica94 96.81% 3.19%
Japonica Intermediate68 89.71% 10.29%
Group VI/Aromatic14 42.86% 57.14%
Intermediate42 83.33% 16.67%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf0620192670 C->A INTERGENIC None