Detailed information of SNP:
|
SNP ID:
sf0620755991(Gbrowse)
Chromosome: chr06 Position: 20755991 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1417 | 83.91% | 16.09% |
| All Indica | 798 | 85.09% | 14.91% |
| All Japonica | 497 | 96.18% | 3.82% |
| Aus | 67 | 0.00% | 100.00% |
| Indica I | 375 | 96.00% | 4.00% |
| Indica II | 213 | 66.67% | 33.33% |
| Indica Intermediate | 210 | 84.29% | 15.71% |
| Temperate Japonica | 335 | 99.10% | 0.90% |
| Tropical Japonica | 94 | 96.81% | 3.19% |
| Japonica Intermediate | 68 | 80.88% | 19.12% |
| Group VI/Aromatic | 14 | 0.00% | 100.00% |
| Intermediate | 41 | 78.05% | 21.95% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0620755991 | G->A | INTERGENIC | None |