Detailed information of SNP:



SNP ID: sf0620830123(Gbrowse)

Chromosome: chr06

Position: 20830123
Major allele: C

Minor allele: T

Reference allele: C

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of C(major allele)Frequency of T(minor allele)
All1418 98.59% 1.41%
All Indica799 100.00% 0.00%
All Japonica496 96.37% 3.63%
Aus67 100.00% 0.00%
Indica I375 100.00% 0.00%
Indica II213 100.00% 0.00%
Indica Intermediate211 100.00% 0.00%
Temperate Japonica334 96.71% 3.29%
Tropical Japonica94 100.00% 0.00%
Japonica Intermediate68 89.71% 10.29%
Group VI/Aromatic14 100.00% 0.00%
Intermediate42 95.24% 4.76%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf0620830123 C->T INTERGENIC None