Detailed information of SNP:
|
SNP ID:
sf0620970325(Gbrowse)
Chromosome: chr06 Position: 20970325 |
Major allele:
A
Minor allele: G Reference allele: A |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of A(major allele) | Frequency of G(minor allele) |
|---|---|---|---|
| All | 1397 | 96.78% | 3.22% |
| All Indica | 777 | 94.59% | 5.41% |
| All Japonica | 497 | 99.80% | 0.20% |
| Aus | 67 | 98.51% | 1.49% |
| Indica I | 370 | 98.38% | 1.62% |
| Indica II | 200 | 88.00% | 12.00% |
| Indica Intermediate | 207 | 94.20% | 5.80% |
| Temperate Japonica | 335 | 99.70% | 0.30% |
| Tropical Japonica | 94 | 100.00% | 0.00% |
| Japonica Intermediate | 68 | 100.00% | 0.00% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 42 | 97.62% | 2.38% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0620970325 | A->G | INTERGENIC | None |