Detailed information of SNP:
|
SNP ID:
sf0621020470(Gbrowse)
Chromosome: chr06 Position: 21020470 |
Major allele:
G
Minor allele: A Reference allele: A |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1386 | 66.59% | 33.41% |
| All Indica | 799 | 99.50% | 0.50% |
| All Japonica | 465 | 3.66% | 96.34% |
| Aus | 67 | 100.00% | 0.00% |
| Indica I | 375 | 100.00% | 0.00% |
| Indica II | 213 | 98.12% | 1.88% |
| Indica Intermediate | 211 | 100.00% | 0.00% |
| Temperate Japonica | 314 | 1.91% | 98.09% |
| Tropical Japonica | 88 | 7.95% | 92.05% |
| Japonica Intermediate | 63 | 6.35% | 93.65% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 41 | 73.17% | 26.83% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0621020470 | A->G | INTERGENIC | None |