Detailed information of SNP:



SNP ID: sf0621551666(Gbrowse)

Chromosome: chr06

Position: 21551666
Major allele: C

Minor allele: T

Reference allele: C

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of C(major allele)Frequency of T(minor allele)
All1378 97.10% 2.90%
All Indica799 100.00% 0.00%
All Japonica457 91.47% 8.53%
Aus67 100.00% 0.00%
Indica I375 100.00% 0.00%
Indica II213 100.00% 0.00%
Indica Intermediate211 100.00% 0.00%
Temperate Japonica302 94.70% 5.30%
Tropical Japonica92 90.22% 9.78%
Japonica Intermediate63 77.78% 22.22%
Group VI/Aromatic14 100.00% 0.00%
Intermediate41 97.56% 2.44%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf0621551666 C->T INTERGENIC None