Detailed information of SNP:
|
SNP ID:
sf0621575741(Gbrowse)
Chromosome: chr06 Position: 21575741 |
Major allele:
A
Minor allele: G Reference allele: A |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of A(major allele) | Frequency of G(minor allele) |
|---|---|---|---|
| All | 1378 | 78.45% | 21.55% |
| All Indica | 768 | 84.64% | 15.36% |
| All Japonica | 495 | 82.02% | 17.98% |
| Aus | 65 | 0.00% | 100.00% |
| Indica I | 375 | 92.53% | 7.47% |
| Indica II | 208 | 81.73% | 18.27% |
| Indica Intermediate | 185 | 71.89% | 28.11% |
| Temperate Japonica | 335 | 76.72% | 23.28% |
| Tropical Japonica | 94 | 92.55% | 7.45% |
| Japonica Intermediate | 66 | 93.94% | 6.06% |
| Group VI/Aromatic | 10 | 10.00% | 90.00% |
| Intermediate | 40 | 60.00% | 40.00% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0621575741 | A->G | INTERGENIC | None |