Detailed information of SNP:
|
SNP ID:
sf0621806448(Gbrowse)
Chromosome: chr06 Position: 21806448 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1418 | 79.69% | 20.31% |
| All Indica | 798 | 89.72% | 10.28% |
| All Japonica | 497 | 76.26% | 23.74% |
| Aus | 67 | 4.48% | 95.52% |
| Indica I | 375 | 94.93% | 5.07% |
| Indica II | 213 | 83.57% | 16.43% |
| Indica Intermediate | 210 | 86.67% | 13.33% |
| Temperate Japonica | 335 | 71.04% | 28.96% |
| Tropical Japonica | 94 | 90.43% | 9.57% |
| Japonica Intermediate | 68 | 82.35% | 17.65% |
| Group VI/Aromatic | 14 | 42.86% | 57.14% |
| Intermediate | 42 | 61.90% | 38.10% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0621806448 | G->A | INTERGENIC | None |