Detailed information of SNP:
|
SNP ID:
sf0622845138(Gbrowse)
Chromosome: chr06 Position: 22845138 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1388 | 97.55% | 2.45% |
| All Indica | 771 | 95.72% | 4.28% |
| All Japonica | 495 | 100.00% | 0.00% |
| Aus | 67 | 100.00% | 0.00% |
| Indica I | 357 | 92.44% | 7.56% |
| Indica II | 207 | 100.00% | 0.00% |
| Indica Intermediate | 207 | 97.10% | 2.90% |
| Temperate Japonica | 333 | 100.00% | 0.00% |
| Tropical Japonica | 94 | 100.00% | 0.00% |
| Japonica Intermediate | 68 | 100.00% | 0.00% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 41 | 97.56% | 2.44% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0622845138 | G->A | INTERGENIC | None |