Detailed information of SNP:
|
SNP ID:
sf0623437257(Gbrowse)
Chromosome: chr06 Position: 23437257 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1414 | 94.34% | 5.66% |
| All Indica | 797 | 94.73% | 5.27% |
| All Japonica | 497 | 100.00% | 0.00% |
| Aus | 65 | 44.62% | 55.38% |
| Indica I | 373 | 93.03% | 6.97% |
| Indica II | 213 | 98.59% | 1.41% |
| Indica Intermediate | 211 | 93.84% | 6.16% |
| Temperate Japonica | 335 | 100.00% | 0.00% |
| Tropical Japonica | 94 | 100.00% | 0.00% |
| Japonica Intermediate | 68 | 100.00% | 0.00% |
| Group VI/Aromatic | 14 | 92.86% | 7.14% |
| Intermediate | 41 | 97.56% | 2.44% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0623437257 | G->A | INTERGENIC | None |