Detailed information of SNP:



SNP ID: sf0624639415(Gbrowse)

Chromosome: chr06

Position: 24639415
Major allele: T

Minor allele: G

Reference allele: T

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of T(major allele)Frequency of G(minor allele)
All1419 95.56% 4.44%
All Indica799 98.75% 1.25%
All Japonica497 100.00% 0.00%
Aus67 26.87% 73.13%
Indica I375 99.73% 0.27%
Indica II213 98.12% 1.88%
Indica Intermediate211 97.63% 2.37%
Temperate Japonica335 100.00% 0.00%
Tropical Japonica94 100.00% 0.00%
Japonica Intermediate68 100.00% 0.00%
Group VI/Aromatic14 100.00% 0.00%
Intermediate42 90.48% 9.52%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf0624639415 T->G INTERGENIC None