Detailed information of SNP:
|
SNP ID:
sf0624710740(Gbrowse)
Chromosome: chr06 Position: 24710740 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1361 | 88.91% | 11.09% |
| All Indica | 788 | 82.11% | 17.89% |
| All Japonica | 497 | 100.00% | 0.00% |
| Aus | 23 | 73.91% | 26.09% |
| Indica I | 370 | 80.81% | 19.19% |
| Indica II | 210 | 83.33% | 16.67% |
| Indica Intermediate | 208 | 83.17% | 16.83% |
| Temperate Japonica | 335 | 100.00% | 0.00% |
| Tropical Japonica | 94 | 100.00% | 0.00% |
| Japonica Intermediate | 68 | 100.00% | 0.00% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 39 | 89.74% | 10.26% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0624710740 | G->A | INTERGENIC | None |