Detailed information of SNP:



SNP ID: sf0624725896(Gbrowse)

Chromosome: chr06

Position: 24725896
Major allele: G

Minor allele: A

Reference allele: G

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of G(major allele)Frequency of A(minor allele)
All1410 97.45% 2.55%
All Indica791 95.45% 4.55%
All Japonica497 100.00% 0.00%
Aus66 100.00% 0.00%
Indica I370 97.30% 2.70%
Indica II212 90.57% 9.43%
Indica Intermediate209 97.13% 2.87%
Temperate Japonica335 100.00% 0.00%
Tropical Japonica94 100.00% 0.00%
Japonica Intermediate68 100.00% 0.00%
Group VI/Aromatic14 100.00% 0.00%
Intermediate42 100.00% 0.00%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf0624725896 G->A INTERGENIC None