Detailed information of SNP:



SNP ID: sf0624900653(Gbrowse)

Chromosome: chr06

Position: 24900653
Major allele: G

Minor allele: A

Reference allele: G

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of G(major allele)Frequency of A(minor allele)
All1414 71.71% 28.29%
All Indica794 57.56% 42.44%
All Japonica497 99.80% 0.20%
Aus67 22.39% 77.61%
Indica I373 34.05% 65.95%
Indica II211 84.36% 15.64%
Indica Intermediate210 72.38% 27.62%
Temperate Japonica335 100.00% 0.00%
Tropical Japonica94 98.94% 1.06%
Japonica Intermediate68 100.00% 0.00%
Group VI/Aromatic14 100.00% 0.00%
Intermediate42 76.19% 23.81%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf0624900653 G->A INTERGENIC None