Detailed information of SNP:
|
SNP ID:
sf0626041695(Gbrowse)
Chromosome: chr06 Position: 26041695 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1406 | 96.59% | 3.41% |
| All Indica | 799 | 99.25% | 0.75% |
| All Japonica | 485 | 91.96% | 8.04% |
| Aus | 67 | 100.00% | 0.00% |
| Indica I | 375 | 100.00% | 0.00% |
| Indica II | 213 | 97.18% | 2.82% |
| Indica Intermediate | 211 | 100.00% | 0.00% |
| Temperate Japonica | 334 | 98.50% | 1.50% |
| Tropical Japonica | 84 | 63.10% | 36.90% |
| Japonica Intermediate | 67 | 95.52% | 4.48% |
| Group VI/Aromatic | 13 | 100.00% | 0.00% |
| Intermediate | 42 | 92.86% | 7.14% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0626041695 | G->A | INTERGENIC | None |