Detailed information of SNP:
|
SNP ID:
sf0626091327(Gbrowse)
Chromosome: chr06 Position: 26091327 |
Major allele:
G
Minor allele: A Reference allele: A |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1384 | 55.71% | 44.29% |
| All Indica | 766 | 87.73% | 12.27% |
| All Japonica | 497 | 1.41% | 98.59% |
| Aus | 66 | 96.97% | 3.03% |
| Indica I | 351 | 90.31% | 9.69% |
| Indica II | 209 | 77.99% | 22.01% |
| Indica Intermediate | 206 | 93.20% | 6.80% |
| Temperate Japonica | 335 | 0.90% | 99.10% |
| Tropical Japonica | 94 | 4.26% | 95.74% |
| Japonica Intermediate | 68 | 0.00% | 100.00% |
| Group VI/Aromatic | 14 | 0.00% | 100.00% |
| Intermediate | 41 | 68.29% | 31.71% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0626091327 | A->G | INTERGENIC | None |