Detailed information of SNP:
|
SNP ID:
sf0626148781(Gbrowse)
Chromosome: chr06 Position: 26148781 |
Major allele:
T
Minor allele: A Reference allele: T |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of T(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1374 | 97.45% | 2.55% |
| All Indica | 758 | 95.38% | 4.62% |
| All Japonica | 496 | 100.00% | 0.00% |
| Aus | 65 | 100.00% | 0.00% |
| Indica I | 349 | 94.56% | 5.44% |
| Indica II | 202 | 98.02% | 1.98% |
| Indica Intermediate | 207 | 94.20% | 5.80% |
| Temperate Japonica | 334 | 100.00% | 0.00% |
| Tropical Japonica | 94 | 100.00% | 0.00% |
| Japonica Intermediate | 68 | 100.00% | 0.00% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 41 | 100.00% | 0.00% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0626148781 | T->A | INTERGENIC | None |