Detailed information of SNP:
SNP ID:
sf0626214300(Gbrowse)
Chromosome: chr06 Position: 26214300 |
Major allele:
C
Minor allele: G Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
Populations | Population Size | Frequency of C(major allele) | Frequency of G(minor allele) |
---|---|---|---|
All | 1418 | 59.10% | 40.90% |
All Indica | 799 | 96.87% | 3.13% |
All Japonica | 497 | 0.80% | 99.20% |
Aus | 67 | 50.75% | 49.25% |
Indica I | 375 | 98.93% | 1.07% |
Indica II | 213 | 93.43% | 6.57% |
Indica Intermediate | 211 | 96.68% | 3.32% |
Temperate Japonica | 335 | 1.19% | 98.81% |
Tropical Japonica | 94 | 0.00% | 100.00% |
Japonica Intermediate | 68 | 0.00% | 100.00% |
Group VI/Aromatic | 14 | 0.00% | 100.00% |
Intermediate | 41 | 63.41% | 36.59% |
Allele Var Effect:
SNP ID | Var | Gene | Effect/Location |
---|---|---|---|
sf0626214300 | G->C | INTERGENIC | None |