Detailed information of SNP:
|
SNP ID:
sf0626743655(Gbrowse)
Chromosome: chr06 Position: 26743655 |
Major allele:
G
Minor allele: A Reference allele: A |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1413 | 61.64% | 38.36% |
| All Indica | 794 | 97.73% | 2.27% |
| All Japonica | 497 | 0.60% | 99.40% |
| Aus | 67 | 95.52% | 4.48% |
| Indica I | 372 | 99.73% | 0.27% |
| Indica II | 212 | 93.87% | 6.13% |
| Indica Intermediate | 210 | 98.10% | 1.90% |
| Temperate Japonica | 335 | 0.90% | 99.10% |
| Tropical Japonica | 94 | 0.00% | 100.00% |
| Japonica Intermediate | 68 | 0.00% | 100.00% |
| Group VI/Aromatic | 14 | 14.29% | 85.71% |
| Intermediate | 41 | 63.41% | 36.59% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0626743655 | A->G | INTERGENIC | None |