Detailed information of SNP:
|
SNP ID:
sf0626886937(Gbrowse)
Chromosome: chr06 Position: 26886937 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1261 | 65.42% | 34.58% |
| All Indica | 645 | 40.00% | 60.00% |
| All Japonica | 497 | 99.40% | 0.60% |
| Aus | 64 | 54.69% | 45.31% |
| Indica I | 290 | 43.10% | 56.90% |
| Indica II | 181 | 38.67% | 61.33% |
| Indica Intermediate | 174 | 36.21% | 63.79% |
| Temperate Japonica | 335 | 99.10% | 0.90% |
| Tropical Japonica | 94 | 100.00% | 0.00% |
| Japonica Intermediate | 68 | 100.00% | 0.00% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 41 | 58.54% | 41.46% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0626886937 | G->A | INTERGENIC | None |