Detailed information of SNP:
|
SNP ID:
sf0627077211(Gbrowse)
Chromosome: chr06 Position: 27077211 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1366 | 97.95% | 2.05% |
| All Indica | 799 | 100.00% | 0.00% |
| All Japonica | 444 | 96.17% | 3.83% |
| Aus | 67 | 83.58% | 16.42% |
| Indica I | 375 | 100.00% | 0.00% |
| Indica II | 213 | 100.00% | 0.00% |
| Indica Intermediate | 211 | 100.00% | 0.00% |
| Temperate Japonica | 298 | 97.99% | 2.01% |
| Tropical Japonica | 85 | 97.65% | 2.35% |
| Japonica Intermediate | 61 | 85.25% | 14.75% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 42 | 100.00% | 0.00% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0627077211 | G->A | INTERGENIC | None |