Detailed information of SNP:
|
SNP ID:
sf0627349087(Gbrowse)
Chromosome: chr06 Position: 27349087 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1387 | 97.62% | 2.38% |
| All Indica | 773 | 96.25% | 3.75% |
| All Japonica | 497 | 100.00% | 0.00% |
| Aus | 61 | 93.44% | 6.56% |
| Indica I | 369 | 96.48% | 3.52% |
| Indica II | 202 | 94.55% | 5.45% |
| Indica Intermediate | 202 | 97.52% | 2.48% |
| Temperate Japonica | 335 | 100.00% | 0.00% |
| Tropical Japonica | 94 | 100.00% | 0.00% |
| Japonica Intermediate | 68 | 100.00% | 0.00% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 42 | 100.00% | 0.00% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0627349087 | G->A | INTERGENIC | None |